IL_6TNU_203
3D structure
- PDB id
- 6TNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 6TNU|1|BQ|A|2971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNU_203 not in the Motif Atlas
- Geometric match to IL_7RQB_101
- Geometric discrepancy: 0.1364
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
6TNU|1|BQ|C|2960
6TNU|1|BQ|G|2961
*
6TNU|1|BQ|C|2970
6TNU|1|BQ|A|2971
6TNU|1|BQ|G|2972
Current chains
- Chain BQ
- 25S rRNA
Nearby chains
- Chain AW
- 60S ribosomal protein L2-A
- Chain BD
- 60S ribosomal protein L10
- Chain eI
- Eukaryotic translation initiation factor 5A-1
- Chain m
- Transfer RNA; tRNA
- Chain n
- Transfer RNA; tRNA
Coloring options: