IL_6TNU_247
3D structure
- PDB id
- 6TNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAAUG*CGCG
- Length
- 11 nucleotides
- Bulged bases
- 6TNU|1|BQ|U|2209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6TNU|1|BQ|C|2204
6TNU|1|BQ|U|2205
6TNU|1|BQ|G|2206
6TNU|1|BQ|A|2207
6TNU|1|BQ|A|2208
6TNU|1|BQ|U|2209
6TNU|1|BQ|G|2210
*
6TNU|1|BQ|C|2235
6TNU|1|BQ|G|2236
6TNU|1|BQ|C|2237
6TNU|1|BQ|G|2238
Current chains
- Chain BQ
- 25S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain AW
- 60S ribosomal protein L2-A
- Chain BT
- 60S ribosomal protein L1
- Chain Q
- 40S ribosomal protein S1-A
- Chain eI
- Eukaryotic translation initiation factor 5A-1
Coloring options: