IL_6TPQ_033

3D structure

PDB id

6TPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNase M5 bound to 50S ribosome with precursor 5S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

ACUAGGGG*UUACCGAAU

Length

17 nucleotides

Bulged bases

6TPQ|1|U|A|941

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TPQ|1|U|A|920
6TPQ|1|U|C|921
6TPQ|1|U|U|922
6TPQ|1|U|A|923
6TPQ|1|U|G|924
6TPQ|1|U|G|925
6TPQ|1|U|G|926
6TPQ|1|U|G|927
*
6TPQ|1|U|U|939
6TPQ|1|U|U|940
6TPQ|1|U|A|941
6TPQ|1|U|C|942
6TPQ|1|U|C|943
6TPQ|1|U|G|944
6TPQ|1|U|A|945
6TPQ|1|U|A|946
6TPQ|1|U|U|947

Current chains

Chain U

pre-23S rRNA

Nearby chains