IL_6TPQ_055

3D structure

PDB id

6TPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNase M5 bound to 50S ribosome with precursor 5S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CCAUUUGAG*CGAGG

Length

14 nucleotides

Bulged bases

6TPQ|1|U|U|1457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TPQ|1|U|C|1452
6TPQ|1|U|C|1453
6TPQ|1|U|A|1454
6TPQ|1|U|U|1455
6TPQ|1|U|U|1456
6TPQ|1|U|U|1457
6TPQ|1|U|G|1458
6TPQ|1|U|A|1459
6TPQ|1|U|G|1460
*
6TPQ|1|U|C|1627
6TPQ|1|U|G|1628
6TPQ|1|U|A|1629
6TPQ|1|U|G|1630
6TPQ|1|U|G|1631

Current chains

Chain U

pre-23S rRNA

Nearby chains