IL_6TPQ_061

3D structure

PDB id

6TPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNase M5 bound to 50S ribosome with precursor 5S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CCAAGC*GUGAUG

Length

12 nucleotides

Bulged bases

6TPQ|1|U|U|1568

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TPQ|1|U|C|1512
6TPQ|1|U|C|1513
6TPQ|1|U|A|1514
6TPQ|1|U|A|1515
6TPQ|1|U|G|1516
6TPQ|1|U|C|1517
*
6TPQ|1|U|G|1564
6TPQ|1|U|U|1565
6TPQ|1|U|G|1566
6TPQ|1|U|A|1567
6TPQ|1|U|U|1568
6TPQ|1|U|G|1569

Current chains

Chain U

pre-23S rRNA

Nearby chains