IL_6TPQ_093

3D structure

PDB id

6TPQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNase M5 bound to 50S ribosome with precursor 5S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GAUAGGUAGGAG*CAUC

Length

16 nucleotides

Bulged bases

6TPQ|1|U|U|2145, 6TPQ|1|U|A|2146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TPQ|1|U|G|2143
6TPQ|1|U|A|2144
6TPQ|1|U|U|2145
6TPQ|1|U|A|2146
6TPQ|1|U|G|2147
6TPQ|1|U|G|2148
6TPQ|1|U|U|2149
6TPQ|1|U|A|2150
6TPQ|1|U|G|2151
6TPQ|1|U|G|2152
6TPQ|1|U|A|2153
6TPQ|1|U|G|2154
*
6TPQ|1|U|C|2188
6TPQ|1|U|A|2189
6TPQ|1|U|U|2190
6TPQ|1|U|C|2191

Current chains

Chain U

pre-23S rRNA

Nearby chains