IL_6UCQ_064

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

6UCQ|1|1A|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UCQ_064 not in the Motif Atlas

Homologous match to IL_7RQB_068

Geometric discrepancy: 0.0927

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

6UCQ|1|1A|C|1686
6UCQ|1|1A|G|1687
6UCQ|1|1A|U|1688
6UCQ|1|1A|A|1689
6UCQ|1|1A|A|1690
6UCQ|1|1A|C|1691
*
6UCQ|1|1A|G|1696
6UCQ|1|1A|G|1697
6UCQ|1|1A|A|1698
6UCQ|1|1A|G|1699
6UCQ|1|1A|A|1700
6UCQ|1|1A|A|1701
6UCQ|1|1A|G|1702

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1D

50S ribosomal protein L2

Chain 1a

Small subunit ribosomal RNA; SSU rRNA