IL_6UCQ_300

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CG(PSU)GCCAG*CGGUAAUACG

Length

18 nucleotides

Bulged bases

6UCQ|1|2a|A|532, 6UCQ|1|2a|U|534

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UCQ|1|2a|C|514
6UCQ|1|2a|G|515
6UCQ|1|2a|PSU|516
6UCQ|1|2a|G|517
6UCQ|1|2a|C|518
6UCQ|1|2a|C|519
6UCQ|1|2a|A|520
6UCQ|1|2a|G|521
*
6UCQ|1|2a|C|528
6UCQ|1|2a|G|529
6UCQ|1|2a|G|530
6UCQ|1|2a|U|531
6UCQ|1|2a|A|532
6UCQ|1|2a|A|533
6UCQ|1|2a|U|534
6UCQ|1|2a|A|535
6UCQ|1|2a|C|536
6UCQ|1|2a|G|537

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2c

30S ribosomal protein S3

Chain 2d

30S ribosomal protein S4

Chain 2l

30S ribosomal protein S12

Chain 2w

Ribosome-recycling factor

Chain 2z

mRNA