IL_6UCQ_362

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GCAG*CGGGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UCQ_362 not in the Motif Atlas

Geometric match to IL_6WZR_001

Geometric discrepancy: 0.387

The information below is about IL_6WZR_001

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.14

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

36

Unit IDs

6UCQ|1|2A|G|2080
6UCQ|1|2A|C|2081
6UCQ|1|2A|A|2082
6UCQ|1|2A|G|2083
*
6UCQ|1|2A|C|2236
6UCQ|1|2A|G|2237
6UCQ|1|2A|G|2238
6UCQ|1|2A|G|2239
6UCQ|1|2A|C|2240

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 2D

50S ribosomal protein L2