IL_6UCQ_364

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGU*ACAG

Length

7 nucleotides

Bulged bases

6UCQ|1|2A|A|2602

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UCQ_364 not in the Motif Atlas

Homologous match to IL_7A0S_092

Geometric discrepancy: 0.5431

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10892.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

61

Unit IDs

6UCQ|1|2A|C|2591
6UCQ|1|2A|G|2592
6UCQ|1|2A|U|2593
*
6UCQ|1|2A|A|2600
6UCQ|1|2A|C|2601
6UCQ|1|2A|A|2602
6UCQ|1|2A|G|2603

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2D

50S ribosomal protein L2

Chain 2w

Ribosome-recycling factor