IL_6UCQ_366

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UCQ_366 not in the Motif Atlas

Homologous match to IL_9DFE_109

Geometric discrepancy: 0.1301

The information below is about IL_9DFE_109

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48489.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

9

Unit IDs

6UCQ|1|2A|U|2847
6UCQ|1|2A|G|2848
6UCQ|1|2A|U|2849
6UCQ|1|2A|A|2850
6UCQ|1|2A|A|2851
6UCQ|1|2A|G|2852
*
6UCQ|1|2A|U|2865
6UCQ|1|2A|U|2866
6UCQ|1|2A|G|2867
6UCQ|1|2A|A|2868
6UCQ|1|2A|G|2869

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2R

50S ribosomal protein L17

Chain 2T

50S ribosomal protein L19