IL_6UO1_114
3D structure
- PDB id
- 6UO1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CCUAAG*UAG
- Length
- 9 nucleotides
- Bulged bases
- 6UO1|1|1a|C|48, 6UO1|1|1a|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UO1_114 not in the Motif Atlas
- Homologous match to IL_4LFB_003
- Geometric discrepancy: 0.0823
- The information below is about IL_4LFB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6UO1|1|1a|C|47
6UO1|1|1a|C|48
6UO1|1|1a|U|49
6UO1|1|1a|A|50
6UO1|1|1a|A|51
6UO1|1|1a|G|52
*
6UO1|1|1a|U|359
6UO1|1|1a|A|360
6UO1|1|1a|G|361
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1l
- 30S ribosomal protein S12
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