IL_6UO1_201

3D structure

PDB id

6UO1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GGCUAGGGG*CUACCAAACC

Length

19 nucleotides

Bulged bases

6UO1|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UO1|1|2A|G|874
6UO1|1|2A|G|875
6UO1|1|2A|C|876
6UO1|1|2A|U|877
6UO1|1|2A|A|878
6UO1|1|2A|G|879
6UO1|1|2A|G|880
6UO1|1|2A|G|881
6UO1|1|2A|G|882
*
6UO1|1|2A|C|894
6UO1|1|2A|U|895
6UO1|1|2A|A|896
6UO1|1|2A|C|897
6UO1|1|2A|C|898
6UO1|1|2A|A|899
6UO1|1|2A|A|900
6UO1|1|2A|A|901
6UO1|1|2A|C|902
6UO1|1|2A|C|903

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2a

Small subunit ribosomal RNA; SSU rRNA

Chain 2w

Transfer RNA; tRNA