IL_6UO1_346

3D structure

PDB id

6UO1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUGUGAACCC*GGGGGAG

Length

17 nucleotides

Bulged bases

6UO1|1|1A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UO1|1|1A|C|2129
6UO1|1|1A|U|2130
6UO1|1|1A|G|2131
6UO1|1|1A|U|2132
6UO1|1|1A|G|2133
6UO1|1|1A|A|2134
6UO1|1|1A|A|2135
6UO1|1|1A|C|2136
6UO1|1|1A|C|2137
6UO1|1|1A|C|2138
*
6UO1|1|1A|G|2153
6UO1|1|1A|G|2154
6UO1|1|1A|G|2155
6UO1|1|1A|G|2156
6UO1|1|1A|G|2157
6UO1|1|1A|A|2158
6UO1|1|1A|G|2159

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains