3D structure

PDB id
6UO1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.95 Å

Loop

Sequence
UGAUA*UGUCA
Length
10 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6UO1|1|2A|U|868
6UO1|1|2A|G|869
6UO1|1|2A|A|870
6UO1|1|2A|U|871
6UO1|1|2A|A|872
*
6UO1|1|2A|U|905
6UO1|1|2A|G|906
6UO1|1|2A|U|907
6UO1|1|2A|C|908
6UO1|1|2A|A|909

Current chains

Chain 2A
23S Ribosomal RNA

Nearby chains

Chain 2Q
50S ribosomal protein L16
Chain 2Z
50S ribosomal protein L25

Coloring options:

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