IL_6UU7_002
3D structure
- PDB id
- 6UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli sigma-S transcription initiation complex with a 6-nt RNA and an NTP ('Old' crystal soaked with UTP, CTP, ddGTP, and dinucleotide ApG for 30 minutes)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.4 Å
Loop
- Sequence
- CACGTATG*CATACGTG
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6UU7|1|111|DC|27
6UU7|1|111|DA|28
6UU7|1|111|DC|29
6UU7|1|111|DG|30
6UU7|1|111|DT|31
6UU7|1|111|DA|32
6UU7|1|111|DT|33
6UU7|1|111|DG|34
*
6UU7|1|222|DC|29
6UU7|1|222|DA|30
6UU7|1|222|DT|31
6UU7|1|222|DA|32
6UU7|1|222|DC|33
6UU7|1|222|DG|34
6UU7|1|222|DT|35
6UU7|1|222|DG|36
Current chains
- Chain 111
- Synthetic DNA 50-mer (promoter non-template strand)
- Chain 222
- Synthetic DNA 50-mer (promoter template strand)
Nearby chains
- Chain DDD
- DNA-directed RNA polymerase subunit beta'
- Chain FFF
- RNA polymerase sigma factor RpoS
Coloring options: