IL_6UZ7_042

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGGAUCGAAG*CGUAGUCU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UZ7|1|2|G|983
6UZ7|1|2|G|984
6UZ7|1|2|G|985
6UZ7|1|2|G|986
6UZ7|1|2|A|987
6UZ7|1|2|U|988
6UZ7|1|2|C|989
6UZ7|1|2|G|990
6UZ7|1|2|A|991
6UZ7|1|2|A|992
6UZ7|1|2|G|993
*
6UZ7|1|2|C|1009
6UZ7|1|2|G|1010
6UZ7|1|2|U|1011
6UZ7|1|2|A|1012
6UZ7|1|2|G|1013
6UZ7|1|2|U|1014
6UZ7|1|2|C|1015
6UZ7|1|2|U|1016

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain AA

KLLA0D16027p

Chain Bp

KLLA0E05941p

Chain O

40S ribosomal protein S14

Chain a

40S ribosomal protein S26