3D structure

PDB id
6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
K.lactis 80S ribosome with p/PE tRNA and eIF5B
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGAC*GUCUUUGG
Length
12 nucleotides
Bulged bases
6UZ7|1|2|C|1095, 6UZ7|1|2|U|1097, 6UZ7|1|2|G|1099
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6UZ7|1|2|C|1033
6UZ7|1|2|G|1034
6UZ7|1|2|A|1035
6UZ7|1|2|C|1036
*
6UZ7|1|2|G|1093
6UZ7|1|2|U|1094
6UZ7|1|2|C|1095
6UZ7|1|2|U|1096
6UZ7|1|2|U|1097
6UZ7|1|2|U|1098
6UZ7|1|2|G|1099
6UZ7|1|2|G|1100

Current chains

Chain 2
18S ribosomal RNA

Nearby chains

Chain C
KLLA0F09812p
Chain L
KLLA0A10483p
Chain N
KLLA0F18040p
Chain V
40S ribosomal protein S21
Chain W
40S ribosomal protein S22
Chain X
RPS23
Chain b
40S ribosomal protein S27

Coloring options:

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