IL_6UZ7_078

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUU*AG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_078 not in the Motif Atlas

Geometric match to IL_4LFB_041

Geometric discrepancy: 0.37

The information below is about IL_4LFB_041

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

6UZ7|1|3|C|49
6UZ7|1|3|U|50
6UZ7|1|3|U|51
*
6UZ7|1|3|A|64
6UZ7|1|3|G|65

Current chains

Chain 3

RNA (76-MER)

Nearby chains

Chain Bo

60S ribosomal protein L44

Chain Bq

Ribosomal protein