IL_6UZ7_086
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_086 not in the Motif Atlas
- Homologous match to IL_8C3A_008
- Geometric discrepancy: 0.1394
- The information below is about IL_8C3A_008
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6UZ7|1|5|C|125
6UZ7|1|5|U|126
6UZ7|1|5|G|127
*
6UZ7|1|5|C|141
6UZ7|1|5|C|142
6UZ7|1|5|G|143
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AG
- KLLA0E00573p
- Chain AN
- Ribosomal protein L15
- Chain AX
- 60S ribosomal protein L25
- Chain Bh
- KLLA0F05247p
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