IL_6UZ7_092
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 6UZ7|1|5|A|398, 6UZ7|1|5|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_092 not in the Motif Atlas
- Homologous match to IL_8C3A_015
- Geometric discrepancy: 0.124
- The information below is about IL_8C3A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.7
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
6UZ7|1|5|G|376
6UZ7|1|5|A|377
6UZ7|1|5|A|378
6UZ7|1|5|C|379
*
6UZ7|1|5|G|390
6UZ7|1|5|A|391
6UZ7|1|5|G|392
6UZ7|1|5|U|393
6UZ7|1|5|G|394
6UZ7|1|5|A|395
6UZ7|1|5|A|396
6UZ7|1|5|A|397
6UZ7|1|5|A|398
6UZ7|1|5|A|399
6UZ7|1|5|G|400
6UZ7|1|5|U|401
6UZ7|1|5|A|402
6UZ7|1|5|C|403
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AP
- KLLA0A06336p
- Chain AY
- KLLA0B05742p
- Chain Bl
- 60S ribosomal protein L39
Coloring options: