IL_6UZ7_093
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGAAAU*ACGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_093 not in the Motif Atlas
- Geometric match to IL_5TBW_015
- Geometric discrepancy: 0.0876
- The information below is about IL_5TBW_015
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.7
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6UZ7|1|5|G|404
6UZ7|1|5|U|405
6UZ7|1|5|G|406
6UZ7|1|5|A|407
6UZ7|1|5|A|408
6UZ7|1|5|A|409
6UZ7|1|5|U|410
*
6UZ7|1|8|A|13
6UZ7|1|8|C|14
6UZ7|1|8|G|15
6UZ7|1|8|G|16
6UZ7|1|8|A|17
6UZ7|1|8|U|18
6UZ7|1|8|C|19
Current chains
- Chain 5
- 25S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain AC
- KLLA0B07139p
- Chain AP
- KLLA0A06336p
- Chain Be
- KLLA0E06843p
Coloring options: