IL_6UZ7_096
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 6UZ7|1|5|A|490, 6UZ7|1|5|U|491
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_096 not in the Motif Atlas
- Geometric match to IL_5TBW_019
- Geometric discrepancy: 0.1399
- The information below is about IL_5TBW_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74024.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|G|488
6UZ7|1|5|G|489
6UZ7|1|5|A|490
6UZ7|1|5|U|491
6UZ7|1|5|A|492
6UZ7|1|5|A|493
6UZ7|1|5|A|494
6UZ7|1|5|U|495
6UZ7|1|5|C|496
*
6UZ7|1|5|G|540
6UZ7|1|5|G|541
6UZ7|1|5|A|542
6UZ7|1|5|A|543
6UZ7|1|5|U|544
6UZ7|1|5|A|545
6UZ7|1|5|C|546
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AC
- KLLA0B07139p
- Chain AF
- KLLA0D03410p
- Chain AM
- KLLA0B13409p
- Chain AS
- 60S ribosomal protein L20
Coloring options: