IL_6UZ7_108

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GU*GGC

Length

5 nucleotides

Bulged bases

6UZ7|1|5|G|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_108 not in the Motif Atlas

Homologous match to IL_8C3A_032

Geometric discrepancy: 0.1287

The information below is about IL_8C3A_032

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

6UZ7|1|5|G|804
6UZ7|1|5|U|805
*
6UZ7|1|5|G|830
6UZ7|1|5|G|831
6UZ7|1|5|C|832

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AA

KLLA0D16027p

Chain AR

KLLA0E12453p

Chain Bp

KLLA0E05941p