IL_6UZ7_129

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUA*UU

Length

5 nucleotides

Bulged bases

6UZ7|1|5|U|1152

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_129 not in the Motif Atlas

Geometric match to IL_5TBW_050

Geometric discrepancy: 0.1549

The information below is about IL_5TBW_050

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

6UZ7|1|5|A|1151
6UZ7|1|5|U|1152
6UZ7|1|5|A|1153
*
6UZ7|1|5|U|1295
6UZ7|1|5|U|1296

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AF

KLLA0D03410p

Chain AO

KLLA0F04675p

Chain AS

60S ribosomal protein L20

Chain Bf

KLLA0D07405p