IL_6UZ7_154

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAG*CCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_154 not in the Motif Atlas

Homologous match to IL_8C3A_081

Geometric discrepancy: 0.1302

The information below is about IL_8C3A_081

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54997.8

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

6UZ7|1|5|A|1864
6UZ7|1|5|A|1865
6UZ7|1|5|G|1866
*
6UZ7|1|5|C|2307
6UZ7|1|5|C|2308
6UZ7|1|5|U|2309

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AV

KLLA0E06997p

Chain AW

60S ribosomal protein L24