IL_6UZ7_173

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

6UZ7|1|5|A|2776

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_173 not in the Motif Atlas

Homologous match to IL_5TBW_094

Geometric discrepancy: 0.151

The information below is about IL_5TBW_094

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_18604.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

46

Unit IDs

6UZ7|1|5|G|2381
6UZ7|1|5|A|2382
*
6UZ7|1|5|U|2775
6UZ7|1|5|A|2776
6UZ7|1|5|C|2777
6UZ7|1|5|C|2778

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AA

KLLA0D16027p