IL_6UZ7_180

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAU*AC

Length

5 nucleotides

Bulged bases

6UZ7|1|5|A|2683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_180 not in the Motif Atlas

Geometric match to IL_5TBW_013

Geometric discrepancy: 0.2731

The information below is about IL_5TBW_013

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

6UZ7|1|5|G|2682
6UZ7|1|5|A|2683
6UZ7|1|5|U|2684
*
6UZ7|1|5|A|2708
6UZ7|1|5|C|2709

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Bb

60S ribosomal protein L29

Chain Bo

60S ribosomal protein L44