IL_6UZ7_184

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUG*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_184 not in the Motif Atlas

Geometric match to IL_4V9F_083

Geometric discrepancy: 0.111

The information below is about IL_4V9F_083

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_46637.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

19

Unit IDs

6UZ7|1|5|U|2794
6UZ7|1|5|U|2795
6UZ7|1|5|G|2796
*
6UZ7|1|5|U|2830
6UZ7|1|5|G|2831

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 1

KLLA0F23265p

Chain AI

KLLA0D05643p