IL_6UZ7_204

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAACG*UUG

Length

8 nucleotides

Bulged bases

6UZ7|1|5|U|3227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_204 not in the Motif Atlas

Homologous match to IL_8C3A_133

Geometric discrepancy: 0.1902

The information below is about IL_8C3A_133

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60154.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

6UZ7|1|5|C|3193
6UZ7|1|5|A|3194
6UZ7|1|5|A|3195
6UZ7|1|5|C|3196
6UZ7|1|5|G|3197
*
6UZ7|1|5|U|3226
6UZ7|1|5|U|3227
6UZ7|1|5|G|3228

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AE

KLLA0B04686p

Chain AM

KLLA0B13409p

Chain Bf

KLLA0D07405p