IL_6UZ7_228

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAAUAAGGAUUGA*UUCUUGAUUUUGU

Length

27 nucleotides

Bulged bases

6UZ7|1|2|G|1227

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6UZ7|1|2|A|1220
6UZ7|1|2|C|1221
6UZ7|1|2|A|1222
6UZ7|1|2|A|1223
6UZ7|1|2|U|1224
6UZ7|1|2|A|1225
6UZ7|1|2|A|1226
6UZ7|1|2|G|1227
6UZ7|1|2|G|1228
6UZ7|1|2|A|1229
6UZ7|1|2|U|1230
6UZ7|1|2|U|1231
6UZ7|1|2|G|1232
6UZ7|1|2|A|1233
*
6UZ7|1|2|U|1249
6UZ7|1|2|U|1250
6UZ7|1|2|C|1251
6UZ7|1|2|U|1252
6UZ7|1|2|U|1253
6UZ7|1|2|G|1254
6UZ7|1|2|A|1255
6UZ7|1|2|U|1256
6UZ7|1|2|U|1257
6UZ7|1|2|U|1258
6UZ7|1|2|U|1259
6UZ7|1|2|G|1260
6UZ7|1|2|U|1261

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain K

KLLA0B08173p

Chain M

40S ribosomal protein S12

Chain d

40S ribosomal protein S29

Chain f

Ubiquitin-40S ribosomal protein S27a