IL_6UZ7_247

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UCUUA*UUUGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_247 not in the Motif Atlas

Geometric match to IL_8S95_002

Geometric discrepancy: 0.2597

The information below is about IL_8S95_002

Detailed Annotation

Triple non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71154.4

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

18

Unit IDs

6UZ7|1|5|U|3202
6UZ7|1|5|C|3203
6UZ7|1|5|U|3204
6UZ7|1|5|U|3205
6UZ7|1|5|A|3206
*
6UZ7|1|5|U|3217
6UZ7|1|5|U|3218
6UZ7|1|5|U|3219
6UZ7|1|5|G|3220
6UZ7|1|5|G|3221

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AO

KLLA0F04675p