IL_6UZ7_255

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_255 not in the Motif Atlas

Homologous match to IL_8CRE_429

Geometric discrepancy: 0.186

The information below is about IL_8CRE_429

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.4

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

95

Unit IDs

6UZ7|1|2|U|748
6UZ7|1|2|U|749
6UZ7|1|2|U|750
*
6UZ7|1|2|A|798
6UZ7|1|2|U|799
6UZ7|1|2|G|800

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4

Chain H

40S ribosomal protein S7

Chain L

KLLA0A10483p

Chain W

40S ribosomal protein S22