IL_6V39_008

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CAUUAAG*UGAUGACG

Length

15 nucleotides

Bulged bases

6V39|1|AN1|U|279, 6V39|1|AN1|U|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|AN1|C|276
6V39|1|AN1|A|277
6V39|1|AN1|U|278
6V39|1|AN1|U|279
6V39|1|AN1|A|280
6V39|1|AN1|A|281
6V39|1|AN1|G|282
*
6V39|1|AN1|U|362
6V39|1|AN1|G|363
6V39|1|AN1|A|364
6V39|1|AN1|U|365
6V39|1|AN1|G|366
6V39|1|AN1|A|367
6V39|1|AN1|C|368
6V39|1|AN1|G|369

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain W

50S ribosomal protein L28