IL_6V39_123

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GGACAACA*UGCUAAUAC

Length

17 nucleotides

Bulged bases

6V39|1|sN1|U|169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|sN1|G|143
6V39|1|sN1|G|144
6V39|1|sN1|A|145
6V39|1|sN1|C|146
6V39|1|sN1|A|147
6V39|1|sN1|A|148
6V39|1|sN1|C|149
6V39|1|sN1|A|150
*
6V39|1|sN1|U|163
6V39|1|sN1|G|164
6V39|1|sN1|C|165
6V39|1|sN1|U|166
6V39|1|sN1|A|167
6V39|1|sN1|A|168
6V39|1|sN1|U|169
6V39|1|sN1|A|170
6V39|1|sN1|C|171

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20