IL_6V39_166

3D structure

PDB id

6V39 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

UACUUGC*GAACUUUA

Length

15 nucleotides

Bulged bases

6V39|1|sN1|U|1123

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V39|1|sN1|U|1119
6V39|1|sN1|A|1120
6V39|1|sN1|C|1121
6V39|1|sN1|U|1122
6V39|1|sN1|U|1123
6V39|1|sN1|G|1124
6V39|1|sN1|C|1125
*
6V39|1|sN1|G|1141
6V39|1|sN1|A|1142
6V39|1|sN1|A|1143
6V39|1|sN1|C|1144
6V39|1|sN1|U|1145
6V39|1|sN1|U|1146
6V39|1|sN1|U|1147
6V39|1|sN1|A|1148

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10