IL_6V3A_001
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_001 not in the Motif Atlas
- Geometric match to IL_5J7L_245
- Geometric discrepancy: 0.1126
- The information below is about IL_5J7L_245
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_04021.2
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6V3A|1|AN1|G|31
6V3A|1|AN1|U|32
6V3A|1|AN1|G|33
6V3A|1|AN1|G|34
6V3A|1|AN1|A|35
6V3A|1|AN1|U|36
6V3A|1|AN1|G|37
*
6V3A|1|AN1|C|509
6V3A|1|AN1|U|510
6V3A|1|AN1|G|511
6V3A|1|AN1|A|512
6V3A|1|AN1|A|513
6V3A|1|AN1|A|514
6V3A|1|AN1|C|515
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
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