3D structure

PDB id
6V3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
UU*GGA
Length
5 nucleotides
Bulged bases
6V3A|1|AN1|G|727
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6V3A_019 not in the Motif Atlas
Geometric match to IL_7RQB_020
Geometric discrepancy: 0.1083
The information below is about IL_7RQB_020
Detailed Annotation
Single bulged G
Broad Annotation
No text annotation
Motif group
IL_00225.3
Basepair signature
cWW-L-cWW
Number of instances in this motif group
42

Unit IDs

6V3A|1|AN1|U|700
6V3A|1|AN1|U|701
*
6V3A|1|AN1|G|726
6V3A|1|AN1|G|727
6V3A|1|AN1|A|728

Current chains

Chain AN1
23s ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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