IL_6V3A_031
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GCUAG*CAAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_031 not in the Motif Atlas
- Homologous match to IL_5J7L_274
- Geometric discrepancy: 0.3745
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6V3A|1|AN1|G|873
6V3A|1|AN1|C|874
6V3A|1|AN1|U|875
6V3A|1|AN1|A|876
6V3A|1|AN1|G|877
*
6V3A|1|AN1|C|896
6V3A|1|AN1|A|897
6V3A|1|AN1|A|898
6V3A|1|AN1|A|899
6V3A|1|AN1|C|900
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L16
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