IL_6V3A_057
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- AUGUAG*UGAGAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_057 not in the Motif Atlas
- Geometric match to IL_3LQX_002
- Geometric discrepancy: 0.2914
- The information below is about IL_3LQX_002
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6V3A|1|AN1|A|1468
6V3A|1|AN1|U|1469
6V3A|1|AN1|G|1470
6V3A|1|AN1|U|1471
6V3A|1|AN1|A|1472
6V3A|1|AN1|G|1473
*
6V3A|1|AN1|U|1509
6V3A|1|AN1|G|1510
6V3A|1|AN1|A|1511
6V3A|1|AN1|G|1512
6V3A|1|AN1|A|1513
6V3A|1|AN1|U|1514
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: