IL_6V3A_077
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GU(7MG)A*UCU
- Length
- 7 nucleotides
- Bulged bases
- 6V3A|1|AN1|U|2064
- QA status
- Modified nucleotides: 7MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_077 not in the Motif Atlas
- Geometric match to IL_5C5W_002
- Geometric discrepancy: 0.1511
- The information below is about IL_5C5W_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
6V3A|1|AN1|G|2063
6V3A|1|AN1|U|2064
6V3A|1|AN1|7MG|2065
6V3A|1|AN1|A|2066
*
6V3A|1|AN1|U|2437
6V3A|1|AN1|C|2438
6V3A|1|AN1|U|2439
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain K
- 50S ribosomal protein L15
Coloring options: