IL_6V3A_141
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- CGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_141 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.1407
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
6V3A|1|sN1|C|577
6V3A|1|sN1|G|578
6V3A|1|sN1|U|579
6V3A|1|sN1|A|580
6V3A|1|sN1|G|581
*
6V3A|1|sN1|U|754
6V3A|1|sN1|G|755
6V3A|1|sN1|A|756
6V3A|1|sN1|G|757
6V3A|1|sN1|G|758
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
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