IL_6V3A_185

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

UAAC*GAG

Length

7 nucleotides

Bulged bases

6V3A|1|sN1|A|1443, 6V3A|1|sN1|A|1444

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3A_185 not in the Motif Atlas

Geometric match to IL_5J7L_065

Geometric discrepancy: 0.2605

The information below is about IL_5J7L_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31531.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

13

Unit IDs

6V3A|1|sN1|U|1442
6V3A|1|sN1|A|1443
6V3A|1|sN1|A|1444
6V3A|1|sN1|C|1445
*
6V3A|1|sN1|G|1452
6V3A|1|sN1|A|1453
6V3A|1|sN1|G|1454

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20