IL_6V3A_190
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_190 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.0903
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
6V3A|1|AN1|G|1664
6V3A|1|AN1|G|1665
6V3A|1|AN1|A|1666
6V3A|1|AN1|A|1667
6V3A|1|AN1|C|1668
6V3A|1|AN1|U|1669
6V3A|1|AN1|A|1670
6V3A|1|AN1|G|1671
6V3A|1|AN1|G|1672
*
6V3A|1|AN1|C|1986
6V3A|1|AN1|U|1987
6V3A|1|AN1|G|1988
6V3A|1|AN1|U|1989
6V3A|1|AN1|C|1990
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L14
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