IL_6V3A_193

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CGAAA(5MU)UCCUUGU*ACCUG

Length

18 nucleotides

Bulged bases

6V3A|1|AN1|A|1934, 6V3A|1|AN1|U|1940, 6V3A|1|AN1|U|1959

QA status

Modified nucleotides: 5MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3A|1|AN1|C|1930
6V3A|1|AN1|G|1931
6V3A|1|AN1|A|1932
6V3A|1|AN1|A|1933
6V3A|1|AN1|A|1934
6V3A|1|AN1|5MU|1935
6V3A|1|AN1|U|1936
6V3A|1|AN1|C|1937
6V3A|1|AN1|C|1938
6V3A|1|AN1|U|1939
6V3A|1|AN1|U|1940
6V3A|1|AN1|G|1941
6V3A|1|AN1|U|1942
*
6V3A|1|AN1|A|1956
6V3A|1|AN1|C|1957
6V3A|1|AN1|C|1958
6V3A|1|AN1|U|1959
6V3A|1|AN1|G|1960

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain sN1

Small subunit ribosomal RNA; SSU rRNA