IL_6V3A_196

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GUGUAGGAUAGGUGGGAGGCUUUGAAGC*GUGGAGCCGUCCUUGAAAUACCACCC

Length

54 nucleotides

Bulged bases

6V3A|1|AN1|U|2107, 6V3A|1|AN1|U|2114, 6V3A|1|AN1|A|2122, 6V3A|1|AN1|U|2126, 6V3A|1|AN1|U|2128, 6V3A|1|AN1|U|2163, 6V3A|1|AN1|U|2168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3A|1|AN1|G|2106
6V3A|1|AN1|U|2107
6V3A|1|AN1|G|2108
6V3A|1|AN1|U|2109
6V3A|1|AN1|A|2110
6V3A|1|AN1|G|2111
6V3A|1|AN1|G|2112
6V3A|1|AN1|A|2113
6V3A|1|AN1|U|2114
6V3A|1|AN1|A|2115
6V3A|1|AN1|G|2116
6V3A|1|AN1|G|2117
6V3A|1|AN1|U|2118
6V3A|1|AN1|G|2119
6V3A|1|AN1|G|2120
6V3A|1|AN1|G|2121
6V3A|1|AN1|A|2122
6V3A|1|AN1|G|2123
6V3A|1|AN1|G|2124
6V3A|1|AN1|C|2125
6V3A|1|AN1|U|2126
6V3A|1|AN1|U|2127
6V3A|1|AN1|U|2128
6V3A|1|AN1|G|2129
6V3A|1|AN1|A|2130
6V3A|1|AN1|A|2131
6V3A|1|AN1|G|2132
6V3A|1|AN1|C|2133
*
6V3A|1|AN1|G|2150
6V3A|1|AN1|U|2151
6V3A|1|AN1|G|2152
6V3A|1|AN1|G|2153
6V3A|1|AN1|A|2154
6V3A|1|AN1|G|2155
6V3A|1|AN1|C|2156
6V3A|1|AN1|C|2157
6V3A|1|AN1|G|2158
6V3A|1|AN1|U|2159
6V3A|1|AN1|C|2160
6V3A|1|AN1|C|2161
6V3A|1|AN1|U|2162
6V3A|1|AN1|U|2163
6V3A|1|AN1|G|2164
6V3A|1|AN1|A|2165
6V3A|1|AN1|A|2166
6V3A|1|AN1|A|2167
6V3A|1|AN1|U|2168
6V3A|1|AN1|A|2169
6V3A|1|AN1|C|2170
6V3A|1|AN1|C|2171
6V3A|1|AN1|A|2172
6V3A|1|AN1|C|2173
6V3A|1|AN1|C|2174
6V3A|1|AN1|C|2175

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain v

Transfer RNA; tRNA