IL_6V3A_209

3D structure

PDB id

6V3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CCUU*AUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3A_209 not in the Motif Atlas

Geometric match to IL_9AXU_030

Geometric discrepancy: 0.3923

The information below is about IL_9AXU_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.1

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

23

Unit IDs

6V3A|1|AN1|C|2098
6V3A|1|AN1|C|2099
6V3A|1|AN1|U|2100
6V3A|1|AN1|U|2101
*
6V3A|1|AN1|A|2181
6V3A|1|AN1|U|2182
6V3A|1|AN1|G|2183

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains