IL_6V3B_010

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3B_010 not in the Motif Atlas

Geometric match to IL_4E48_003

Geometric discrepancy: 0.133

The information below is about IL_4E48_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

6V3B|1|AN1|C|305
6V3B|1|AN1|U|306
6V3B|1|AN1|C|307
*
6V3B|1|AN1|G|314
6V3B|1|AN1|U|315
6V3B|1|AN1|G|316

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L24