IL_6V3B_085

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GAUAGGUGGGAGGCUUUGAAGC*GUGGAGCCGUCC

Length

34 nucleotides

Bulged bases

6V3B|1|AN1|U|2114, 6V3B|1|AN1|U|2118, 6V3B|1|AN1|G|2119, 6V3B|1|AN1|G|2120, 6V3B|1|AN1|U|2128

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3B|1|AN1|G|2112
6V3B|1|AN1|A|2113
6V3B|1|AN1|U|2114
6V3B|1|AN1|A|2115
6V3B|1|AN1|G|2116
6V3B|1|AN1|G|2117
6V3B|1|AN1|U|2118
6V3B|1|AN1|G|2119
6V3B|1|AN1|G|2120
6V3B|1|AN1|G|2121
6V3B|1|AN1|A|2122
6V3B|1|AN1|G|2123
6V3B|1|AN1|G|2124
6V3B|1|AN1|C|2125
6V3B|1|AN1|U|2126
6V3B|1|AN1|U|2127
6V3B|1|AN1|U|2128
6V3B|1|AN1|G|2129
6V3B|1|AN1|A|2130
6V3B|1|AN1|A|2131
6V3B|1|AN1|G|2132
6V3B|1|AN1|C|2133
*
6V3B|1|AN1|G|2150
6V3B|1|AN1|U|2151
6V3B|1|AN1|G|2152
6V3B|1|AN1|G|2153
6V3B|1|AN1|A|2154
6V3B|1|AN1|G|2155
6V3B|1|AN1|C|2156
6V3B|1|AN1|C|2157
6V3B|1|AN1|G|2158
6V3B|1|AN1|U|2159
6V3B|1|AN1|C|2160
6V3B|1|AN1|C|2161

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains