IL_6V3B_089

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

6V3B|1|AN1|U|2398

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3B_089 not in the Motif Atlas

Homologous match to IL_4WF9_088

Geometric discrepancy: 0.4241

The information below is about IL_4WF9_088

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

6V3B|1|AN1|U|2397
6V3B|1|AN1|U|2398
6V3B|1|AN1|C|2399
*
6V3B|1|AN1|G|2410
6V3B|1|AN1|G|2411

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L33

Chain 2

50S ribosomal protein L35

Chain K

50S ribosomal protein L15